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Best Nests:
Downeast and Acadia

Downeast Acadia
Old Quarry Adventures Old Quarry Adventures - Stonington.
Paddle a kayak among eiders or climb aboard the "Nigh Duck" to visit Atlantic Puffins, Razorbills, and Great Cormorants at Seal Island. This award winning facility offers a quiet, wooded campground and a 3-private room bunkhouse, for a peaceful nights sleep after an exhausting day of adventure. The Penobscot Bay is home to nearly 30 species of pelagics and the Stonington archipelago is home to the largest concentration of bald eagles in the lower 48 states. (See: Wings, Waves, Woods Festival)
Inn On The Harbor Inn On The Harbor - Stonington.
Perfect. On the waterfront overlooking the scenic harbor, in town among the shops galleries, and restaurants - each room is named after one of Maine's famous windjammer sailboats. the harbor is a famous launch site for kayaks, and the puffin tour from Old Quarry Adventures is close by. Bird hard; rest easy.

Williams Pond Lodge Bed & Breakfast - Bucksport.
Designed from its inception to be an eco-tourism destination, this photovoltaic-powered B&B is nestled against a secluded pond beneath the shadow of Hoxie Hill. Cozy guestrooms with gas fireplaces, private baths, and beautiful views over the pond and surrounding woods. With over 20 forested acres and over 3000 feet of shoreline, guests can rise early and get right into nature before a delicious breakfast; enjoy free use of the canoe and kayaks waiting on the shore. It's an hour to Acadia National Park, a half hour into the Bangor area, or just a quick trot down Route 1 to the Midcoast area. The Wildlands - site #39 of the Maine Birding Trail - is just around the corner. Other sites on the Blue Hill peninsula are nearby. Certified: Environmental Leader.
Williams Pond Lodge

Alamoosook Lakeside Inn - Orland
This is one of the first Inns to be certified under Maine’s Environmental Leader Program, the Alamoosook Lakeside Inn provides guests an opportunity to savor the beauty of nature in a retreat-like setting. The area supports a diverse wildlife population including loons, bald eagles, deer, beaver and even a passing black bear. After a hearty breakfast, enjoy a day of sightseeing or simply swimming, fishing, or canoeing at our lake. The Inn is the perfect central location for visiting famous Maine tourist attractions in communities such as Bar Harbor, Acadia National Park, Blue Hill and Camden. Certified: Environmental Leader
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Alamoosook Lakeside Inn

Twilite Motel - Ellsworth.
When the top priority is birding, birders love the location and the economy of this motel. Sited just a mile west of Ellsworth, it is a quick run into Acadia National Park and the Bar Harbor area, but it is also within easy striking distance of the rest of the coastline and the boreal birding hot spots. It's 40 minutes southeast to Deer Isle. It's merely 30 minutes east to the Schoodic portion of Acadia National Park. It's just a half hour west to Bangor and then on to northern forest areas above the city. A big trip list often results from a stay at this motel because it is central to so many different habitats. Simple. Convenient. Affordable.
Twilite Motel

Ann's Point Inn - Bass Harbor.
This inn is a luxurious four-diamond contemporary B&B on the quiet side of Mt. Desert Island--secluded and romantic, yet close to beautiful Acadia National Park and the towns of Bass Harbor, Southwest Harbor and Bar Harbor, Maine. Sitting on two acres at the end of a peninsula in Bass Harbor, this lovely inn is surrounded on three sides by scenic harbor waters. Four luxurious guest rooms with water views, an indoor heated pool, a Finnish sauna, a jet-filled hot tub, and nearly 700 feet of private shoreline suggest why some guests tell us Ann's Point Inn is “a little piece of paradise”. Birders like the quiet solitude and the proximity to some of Acadia National Park's best birding sites, including this harbor, the Bass Harbor Head Light around the corner, the Wonderland and Ship Harbor trails just minutes away, and the expansive ocean views at Seawall in Manset. Certified: Environmental Leader.
Ann's Point Inn

Bass Harbor Cottages - Bass Harbor.
These unique accommodations perfectly fit the lifestyle of a visiting birder: quiet, secluded, waterfront, close to some of the best birding spots in Acadia National Park, and equipped as an ideal headquarters for a multi-day exploration of both the park and the downeast coast. Get comfortable in a room at the Country Inn, or select housekeeping accommodations with a suite in the Boat House Cottage, or choose a fully furnished personal cottage. Located on the 'quietside' of Mount Desert Island, the harbor-side cottages have spectacular views of the water from a country-garden setting. Built in the late 1800s, The Country Inn is reminiscent of a by-gone era and offers comfortable rooms with queen beds, fireplaces, in-room refrigerators, in-room coffee and private baths. Full kitchen facilities allow birders the flexibility to keep any schedule.
Bass Harbor Cottages

Oceanside Meadows Inn - Prospect Harbor.
Located very near Schoodic Point of Acadia National Park but just off-the-beaten path, this inn is surrounded by extraordinary birding habitat. Guests are within driving distance of all the boreal and ocean species hidden along the downeast coast, but may find some of the birds they want just by walking out the front door. There's a sheltered bay across the street, a hidden saltwater marsh behind, and a warren of footpaths and dirt roads through the adjacent spruce forest. The mansion was originally built for a sea captain and has operated as an inn since 1860. The owners share backgrounds in education and marine biology, and their knowledge of the surrounding ecosystem is unparalleled. 
Oceanside Meadows Inn

Machias Motor Inn - Machias.
It's simple. This is where birders stay downeast. It's ideally located, midway between the two puffin tour boats that visit Machias Seal Island. It is near many of the better boreal birding sites along the Maine coast. Best of all, every room looks out onto the Machias River which is often teeming with birds. Shorebirds at low tide give way to terns, gulls, and waterfowl at high tide - maybe even a harbor seal out your back window. Expect a Bald Eagle roosting across river. Walk up to the Sunrise Trail and find the Nelson's Sparrows. When you're tuckered out and ready to eat, you're right next to one of the most popular restaurants in downeast Maine. The motel is much more comfortable than its economical price would suggest. No wonder all the birding tours stay here.
Machias Motor Inn

Lubec Bay Cottage  - Lubec
This is an extraordinary opportunity. This stylish rental cottage looks out onto the South Lubec Sand Flats, arguably one of the top ten places to bird in Maine. Sit on the porch and listen to the Nelson's Sparrows. Hit the flats in shorebird season and marvel at the diversity. Wander up the road to Quoddy Head State Park and scan the Grand Manan Channel for Razorbills and Common Murres. You're less than 10 minutes away from one of the most notorious Spruce Grouse sites in the state. This is the epicenter of birding downeast, and you can wake up every morning  right in the middle of it. Book quickly. It fills fast. Certified: Environmental Leader.
Lubec Bay Cottage